1	import Base
2	import ./EdlibTypes.bend as Types
3	import ./src/Myers.bend as Myers
4	import ./src/Batch.bend as Batch
5	
6	# Public CPU library entry point, independent of CLI and foreign transport.
7	def distance(query: String, target: String) -> Nat:
8	  Myers.distance(query, target)
9	
10	def default_config() -> Types.AlignConfig:
11	  Types.default_config()
12	
13	def align(query: String, target: String, config: Types.AlignConfig) -> Types.AlignResult:
14	  Myers.edlib_align(query, target, config)
15	
16	# One result per job, in input order, with independent CPU alignment leaves.
17	def align_batch(jobs: List<&2, Types.AlignJob>) -> List<&2, Types.AlignResult>:
18	  Batch.align_batch(jobs)
19	
20	# Format any path, including an explicitly empty path, independently of align.
21	def alignment_to_cigar(operations: List<&2, Types.Operation>, format: Types.CigarFormat) -> String:
22	  Types.alignment_to_cigar(operations, format)